Introductory Biochemistry
Chemistry 330-01, -02 (CRN
182, 186)
| Class, Test Schedule |
(Room: HECO 138- M,W,F 10 AM) |
Spring 2008 |
| Instructor: Dr. Terry L. Helser |
Office: PS 227 |
Phone: 607-436-3518 |
E-mail To: HELSERTL@oneonta.edu.
Text:
Biochemistry, 5th Ed., 2006, M. Campbell & S. Farrell (Thomson Brooks/Cole Publishers)
Catalog Description: A survey of the basic biochemistry
one needs to understand recent medical and biotechnological advances. The
structure and functions of molecules and macromolecules in energy and genetic
metabolism are studied. (LA, CW)
Prerequisite: CHEM 226 or 221.
Click on the highlighted text to move directly to
sections 1, 2 or 3
of the class schedule, to the grade scale, or to
the bottom of the page for addresses and other options.
You also can move to the lab schedule, the lab
grading information, and the general information
on lab operation. Study guides are linked to the reading assignments.
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Month & Days
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_Study Topic__
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Reading Assignment
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I. Life's Structure
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Autobiography |
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January 16,18
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Introduction, Co-op Class
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Ch. 1
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21,23,25
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Cells & Atoms
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Ch. 2
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28,30, February 1
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Bonds & Water
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Ch. 3
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4,6,8
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pH
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Ch. 3
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11,13,15
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Amino Acids (Model Building)
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Ch. 4
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February 18-22 |
Spring Break - No Classes |
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25,29
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Protein Structure, Sequencing
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Ch. 6
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February 27
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Exam I (Wednesday,
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HECO 138, 10 AM)
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page?
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Month & Days
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II. Energy Metabolism
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Reading Assignment
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March 3,5,7
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Enzymes & Energy
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| 10,12,14 |
Enzyme Kinetics
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Ch. 15 |
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17,19,21
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Metabolism of Sugars
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Ch. 16, 17
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March 24-28 |
Spring Break - No Classes |
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31, April 2,4
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Krebs Cycle
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Ch. 19
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April 7,9
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Electron Transport, Ox. Phosphorylation
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Ch. 20
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April 11
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Exam II (Friday, HECO 138, 10 AM)
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Ch. 8
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Month & Days
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III. Genetic Metabolism
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Reading Assignment
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April 14,16,18
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Lipid Structure, ß Oxidation
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21,23,25
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Nucleic Acids
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Ch. 9 |
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28,30, May 2
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Replication
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Ch. 10, 11
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5 (7 study day)
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Transcription & The Genetic Code
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Ch. 12, Ch. 11.2
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May 9
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Final Exam (Friday, HECO 138,
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8 AM - 10:30 AM)
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Grading
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Hourly Exams
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2 x 100 pts. = 200 pts.
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Scale: 90-100%
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A
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Final Exam
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200 pts.
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80-89%
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B
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Research Paper & Class Work & Quizzes
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100 pts.
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70-79%
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C
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Laboratory Evaluations
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200 pts.
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60-69%
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D
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Total: 700 pts.
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0-59%
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E
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You may earn up to 35 points for extra credit problem
sets given throughout the semester. Tests have 10% more points than listed
so I can challenge the best.
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Laboratory Schedule (Room:
PSci 205 - Thursday 1-4, Friday 2-5 PM) Spring, 2008
Required Materials: Graph Ruled Lab Notebook,
Safety Goggles
You can go to the second or
third
part of the lab schedule, lab grading procedures or general
information
on lab time management from here.
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Month & Days
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Laboratory Topic
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Evaluation (Due Date)
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January 17,18
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Form Groups, Check In, Plan Analysis
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1-Oral Progress Rpt. |
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24,25
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#1 Lab Solutions Analysis
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1-Prop. (draft 1/22,23),
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31, February 1
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Lab Solutions Analysis
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1-2nd Proposal (1/29,30)
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7,8
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Solutions Analysis Reports
#2 Enzyme Catalyzed
Reactions
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1-Oral
Rpt., Peer Evaluation
2-Oral Progress Rpt.
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14,15
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Enzyme Catalyzed Reactions
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1-Final Rpt. (2/15)
2-Proposal (2/12,13) |
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Month & Days
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Laboratory Topic
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Evaluation (Due Date)
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21,22
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Spring Break - No labs
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28,29
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Enzyme Catalyzed
Reactions
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2-2nd Proposal (2/26,27)
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March 6,7
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Enzyme Catalyzed
Reactions
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2-3rd Proposal (3/4,5)
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13,14
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Enzyme Reactions Report
#3 Cholesterol Analysis
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2-Oral Rpt., Final Rpt. 3/21. 3-1st Proposal (3/18,19)
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20,21
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Cholesterol Analysis
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3-2nd Proposal (4/1,2)
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Month & Days
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Laboratory Topic
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Evaluation (Due Date)
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27,28
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Spring Break - No labs
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April 3,4
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Cholesterol Analysis
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3-2nd Proposal (4/1,2) |
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10,11
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Cholesterol Analysis Report
Vitamin C in Foods
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- 3-Oral Rpt.,
- 4-Proposal (4/15,16)
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17,18
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Vitamin C in Foods
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4-Proposal (4/22,23)
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24,25
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Vitamin C in Foods
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3-Final Rpt. (4/18)
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May 1,2
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Vitamin C in Foods Report
The Gene Game (Check Out)
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4-Oral
Rpt., Final Rpt. (5/7) |
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May 9
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Final Exam (Friday, HECO 138,
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8 AM - 10:30 AM)
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of the lab schedule, to the
top of the page, or back
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Grading Policies:
Your point total for lab quizzes,
proposals, written and oral reports will be divided by the total possible
for a % of 200 points. The proposal with objective, experimental plan with detailed procedures/flow diagram, references,
MSDSs and safety notes (which proves you are prepared to do each experiment
safely), must be accepted by your instructor before you will be
allowed to do the lab (submit on email no later than the Tuesday or Wednesday
before the lab). One point /day will be subtracted for reports
submitted after due dates.
Notebooks may be collected after
the labs at the instructor's whim.
-
Please note: You are to use your notebook to
prepare for each lab with suitable notes on procedures, flow charts,
tables for data, etc.; to make notes and take data during the lab;
and to do calculations and write your results and conclusions after
the lab. Each of these parts will be evaluated.
Oral
reports are awarded 100 points, of which 80% is for the group's
presentation and 20% for the individual's stage presence, poise and participation.
Generally, the score is an average of the peer evaluations from other teams
and the instructor's. Copies of the printed grading form are available
in the laboratory.
Written Reports must be typed, spaced >1.5
lines, and signed by all group members to verify that they have proofread it and agree to accept the resulting grade. They must contain team member
names and job titles (note major author), an objective, introduction,
flow diagram/procedure, safety notes, results (essay describing data tables,
diagrams and plots), discussion and reference sections. You must
be credited as the major author of at least one (1) lab report during
the semester. This grade will be counted individually for the author and
added to the lab total for your group. (See grading
below.) One point /day will be subtracted for reports submitted after
due dates.
Attendance:
You must be credited as the
major author of at least 1 lab report and score 60% on lab evaluations
to pass the course. If you miss more than 1/3 of the labs, you will earn
an E for the course, no matter what your test scores total. Plagiarism
(see your Handbook) will not be tolerated. College and departmental policies apply to this course.
Safety:
Approved clothing and safety goggles must
be worn when
any experimental work is occurring. Doing unauthorized
experiments or procedures is prohibited. If in doubt, ask the instructor.
All accidents involving personal injury, however minor, must be reported immediately
to the instructor. The instructor has the right to expel anyone from the
laboratory without credit for unsafe or offensive behavior or dress.
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Introductory Biochemistry 330-01
Lab Information
1st Week, Thursday/Friday lab:
Oral (group) report from prior project in
1st hour.
Peer evaluation of other teams' presentations.
Receive and study the next project. Groups
work on the procedures and techniques they will need, including doing trials
with known materials. Ask for demonstrations of equipment and techniques.
Last 1/2 hour, teams do oral brainstorming on
how they will attack the problem. Turn in requests for materials,
equipment needed.
2nd & 3rd Week:
On Tuesday/Wednesday, submit the group's proposal
for the problem (objective (why), procedure, flow chart (how),
safety and how to handle data) by e-mail. Must be accepted by management
before you can do the lab! - 1 point/day off project total for
late or inadequate proposals.
On Friday, turn in typed, final report
on prior project. (The major author must be clearly shown.)
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On Thursday/Friday: Do the experimental work in the laboratory.
Turn in notebooks at end of lab, if requested.
-
On Tuesday/Wednesday, submit the group's proposal
for the next lab period (objective (why), progress made last week (data, graphs, conclusions), and procedure, flow chart (how),
safety and how to handle data) by e-mail. Must be accepted by management
before you can do the lab! - 1 point/day off project total for
late or inadequate proposals.
4th Week:
-
On Thursday/Friday: Give oral report on results (peer groups and
instructor evaluations averaged (100 points). Both individual and group
sections evaluated). Use feedback from forms and other team reports to
produce a final, typed, group report.
-
Friday: turn in typed, final report on project
(each member of the group signs it to indicate they have proofread it and
accept responsibility and credit for the work = 100 points).
Grading:
(all points
are the maximum available)
Oral (group) report = 100 points
Group's proposal; Email by Tues/Wed = 10 points
Notebook, Quiz = 10 points each
Final, typed group reports = 100 points each
Total - 1 point/day late off
project total = % of 200 points total
Final, typed report you authored = 100 points
If you must miss a class, lab or group meeting,
you must inform your group and instructor. Your group should decide how
you can repay your responsibilities to the group. Options might be to do
extra library research, proposal or report writing, computer searches or
whatever the group decides is adequate repayment for the loss of your participation.
If the group decides your excuse was not valid, they may consider a loss
of credit as appropriate punishment, and should so inform you and the instructor.
A group can fire a member who is uncooperative or unproductive. It is that
member's responsibility, then, to join another team or to do all the projects
alone.
Penalties, generally -1 point for each day group
reports are late, will be deducted from the primary author's grade for
that report, not the other group members' grades, if requested by the group
in writing or by e-mail.
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top
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If you have questions or comments, write the:
Author of this page: Terry
Helser - helsertl@oneonta.edu
Web Coordinator: Philip S. Bidwell - bidwelps@oneonta.edu
Or return to the SUNY
@ Oneonta Home Page to see where we live and work.
Last Modified on 1/7/2008
